Basic Information
Gene Model:Bol045915
Gene Family:Protein Kinase Gene Families
Chromosome:C08
Scaffold:Scaffold000002
Sequence:
 | 
Gene Structure
Nucleotide Length:4689 bp
Transcript Length:2349 bp
Protein Length:782 aa
Strand:+
Location:C08: 36211392 : 36216080
Gene CDSs(3): 1-1021 | 3267-3386 | 3482-4689 |
Protein Sequence Features
Interpro
DatabaseTermsIdentifierStartEndE-valueInterPro IDDescription

Note: this gene is not annotated by InterPro, so no annotation information was collected in Bolbase.

Gene Ontology
GO TermGO TypeDescription
GO:0004672 Molecular Function protein kinase activity
GO:0004674 Molecular Function protein serine/threonine kinase activity
GO:0005524 Molecular Function ATP binding
GO:0006468 Biological Process protein phosphorylation
GO:0016021 Cellular Component integral to membrane
Swiss-Prot
Best HitE_value Description
Q9LN590.0WAKLK_ARATH Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2
TrEMBL
Best HitE_value Description
D7KHD20.0D7KHD2_ARALY Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_889371 PE=4 SV=1
KEGG
Best HitE_valueKOEC or Symbol Description
ath:AT1G143706e-52K00924E2.7.1.---
Gene Cluster
Orthologs
OrthoMCL GroupSpeciesGene List
ORTHOMCL72(75 genes,6 taxa):Arabidopsis thalianaAT1G16110.1
ORTHOMCL72(75 genes,6 taxa):Arabidopsis thalianaAT1G16120.1
ORTHOMCL72(75 genes,6 taxa):Arabidopsis thalianaAT1G16130.1
ORTHOMCL72(75 genes,6 taxa):Arabidopsis thalianaAT1G16150.1
ORTHOMCL72(75 genes,6 taxa):Arabidopsis thalianaAT1G16160.1
ORTHOMCL72(75 genes,6 taxa):Arabidopsis thalianaAT1G16260.1
ORTHOMCL72(75 genes,6 taxa):Arabidopsis thalianaAT1G17910.1
ORTHOMCL72(75 genes,6 taxa):Arabidopsis thalianaAT1G19390.1
ORTHOMCL72(75 genes,6 taxa):Arabidopsis thalianaAT1G69730.1
ORTHOMCL72(75 genes,6 taxa):Arabidopsis thalianaAT1G79670.1
ORTHOMCL72(75 genes,6 taxa):Arabidopsis thalianaAT1G79680.1
ORTHOMCL72(75 genes,6 taxa):Arabidopsis thalianaAT4G31100.1
ORTHOMCL72(75 genes,6 taxa):Arabidopsis thalianaAT4G31110.1
ORTHOMCL72(75 genes,6 taxa):Brassica oleraceaBol009838
ORTHOMCL72(75 genes,6 taxa):Brassica oleraceaBol009839
ORTHOMCL72(75 genes,6 taxa):Brassica oleraceaBol009840
ORTHOMCL72(75 genes,6 taxa):Brassica oleraceaBol010697
ORTHOMCL72(75 genes,6 taxa):Brassica oleraceaBol011559
ORTHOMCL72(75 genes,6 taxa):Brassica oleraceaBol018028
ORTHOMCL72(75 genes,6 taxa):Brassica oleraceaBol018030
ORTHOMCL72(75 genes,6 taxa):Brassica oleraceaBol018031
ORTHOMCL72(75 genes,6 taxa):Brassica oleraceaBol021492
ORTHOMCL72(75 genes,6 taxa):Brassica oleraceaBol021493
ORTHOMCL72(75 genes,6 taxa):Brassica oleraceaBol026855
ORTHOMCL72(75 genes,6 taxa):Brassica oleraceaBol029330
ORTHOMCL72(75 genes,6 taxa):Brassica oleraceaBol033707
ORTHOMCL72(75 genes,6 taxa):Brassica oleraceaBol038554
ORTHOMCL72(75 genes,6 taxa):Brassica oleraceaBol038555
ORTHOMCL72(75 genes,6 taxa):Brassica oleraceaBol040524
ORTHOMCL72(75 genes,6 taxa):Brassica oleraceaBol040525
ORTHOMCL72(75 genes,6 taxa):Brassica oleraceaBol045915
ORTHOMCL72(75 genes,6 taxa):Brassica rapaBra003598
ORTHOMCL72(75 genes,6 taxa):Brassica rapaBra011245
ORTHOMCL72(75 genes,6 taxa):Brassica rapaBra011247
ORTHOMCL72(75 genes,6 taxa):Brassica rapaBra015361
ORTHOMCL72(75 genes,6 taxa):Brassica rapaBra016370
ORTHOMCL72(75 genes,6 taxa):Brassica rapaBra024026
ORTHOMCL72(75 genes,6 taxa):Brassica rapaBra025736
ORTHOMCL72(75 genes,6 taxa):Brassica rapaBra026731
ORTHOMCL72(75 genes,6 taxa):Brassica rapaBra026732
ORTHOMCL72(75 genes,6 taxa):Brassica rapaBra030595
ORTHOMCL72(75 genes,6 taxa):Brassica rapaBra030596
ORTHOMCL72(75 genes,6 taxa):Brassica rapaBra031078
ORTHOMCL72(75 genes,6 taxa):Brassica rapaBra031079
ORTHOMCL72(75 genes,6 taxa):Brassica rapaBra035134
ORTHOMCL72(75 genes,6 taxa):Brassica rapaBra035135
ORTHOMCL72(75 genes,6 taxa):Vitis viniferaGSVIVT01008212001
ORTHOMCL72(75 genes,6 taxa):Vitis viniferaGSVIVT01008432001
ORTHOMCL72(75 genes,6 taxa):Populus trichocarpaPOPTR_0001s03190.1
ORTHOMCL72(75 genes,6 taxa):Populus trichocarpaPOPTR_0001s03210.1
ORTHOMCL72(75 genes,6 taxa):Populus trichocarpaPOPTR_0001s03240.1
ORTHOMCL72(75 genes,6 taxa):Populus trichocarpaPOPTR_0001s07540.1
ORTHOMCL72(75 genes,6 taxa):Populus trichocarpaPOPTR_0001s07550.1
ORTHOMCL72(75 genes,6 taxa):Populus trichocarpaPOPTR_0001s07620.1
ORTHOMCL72(75 genes,6 taxa):Populus trichocarpaPOPTR_0001s07630.1
ORTHOMCL72(75 genes,6 taxa):Populus trichocarpaPOPTR_0001s07650.1
ORTHOMCL72(75 genes,6 taxa):Populus trichocarpaPOPTR_0003s18410.1
ORTHOMCL72(75 genes,6 taxa):Populus trichocarpaPOPTR_0003s18440.1
ORTHOMCL72(75 genes,6 taxa):Populus trichocarpaPOPTR_0003s18470.1
ORTHOMCL72(75 genes,6 taxa):Populus trichocarpaPOPTR_0003s18480.1
ORTHOMCL72(75 genes,6 taxa):Populus trichocarpaPOPTR_0003s18490.1
ORTHOMCL72(75 genes,6 taxa):Populus trichocarpaPOPTR_0003s18500.1
ORTHOMCL72(75 genes,6 taxa):Populus trichocarpaPOPTR_0004s20370.1
ORTHOMCL72(75 genes,6 taxa):Populus trichocarpaPOPTR_0018s14500.1
ORTHOMCL72(75 genes,6 taxa):Populus trichocarpaPOPTR_0018s14510.1
ORTHOMCL72(75 genes,6 taxa):Populus trichocarpaPOPTR_0075s00200.1
ORTHOMCL72(75 genes,6 taxa):Populus trichocarpaPOPTR_0075s00210.1
ORTHOMCL72(75 genes,6 taxa):Populus trichocarpaPOPTR_0112s00200.1
ORTHOMCL72(75 genes,6 taxa):Populus trichocarpaPOPTR_0112s00220.1
ORTHOMCL72(75 genes,6 taxa):Populus trichocarpaPOPTR_0112s00230.1
ORTHOMCL72(75 genes,6 taxa):Populus trichocarpaPOPTR_0126s00200.1
ORTHOMCL72(75 genes,6 taxa):Populus trichocarpaPOPTR_0126s00240.1
ORTHOMCL72(75 genes,6 taxa):Populus trichocarpaPOPTR_0316s00220.1
ORTHOMCL72(75 genes,6 taxa):Populus trichocarpaPOPTR_1809s00200.1
ORTHOMCL72(75 genes,6 taxa):Carica papayaevm.TU.supercontig_106.105
Tandem Duplication
ClusterGene Num.Gene List

The tandem genes of this gene was not detected with strict parameters, so there is no information collected in Bolbase.

Synteny Analysis
Synteny Genes
Compared to A.thaliana Compared to B.rapa
Synteny Regions
SpeciesRegionMapped SpeciesMapped RegionNum. of Genewise
B.oleraceaC08:36209518..36419468 (-)A.thalianaChr1:28047576..28218330 (+)12
SpeciesRegionMapped SpeciesMapped RegionNum. of Genewise
B.oleraceaC08:35446303..36957712 (+)B.rapaA09:3964911..5296599 (-)181
Trplicated Block
BlockBest HitStartENDChromosomeSubgenomeNum. of Gene Pairs on Block

Note: this gene was no corresponding triplicated genes.

 
@2012 Department of Genomics and Molecular Biology, Oil Crops Research Institute.


logo