| Basic Information |
| Gene Model: | Bol038441 |
| Gene Family: | Protein Kinase Gene Families |
| Chromosome: | C05 |
| Scaffold: | Scaffold000021 |
| Sequence: | |
| Gene Structure |
|
| Nucleotide Length: | 1206 bp |
| Transcript Length: | 1206 bp |
| Protein Length: | 401 aa |
| Strand: | + |
| Location: | C05: 20973629 : 20974834 |
| Gene CDSs(1): | 1-1206 | |
| Protein Sequence Features |
| Interpro |
 |
| Database | Terms | Identifier | Start | End | E-value | InterPro ID | Description | | Seg | seg | seg |
315 |
324 |
NA | Not found | Not found | | Seg | seg | seg |
378 |
389 |
NA | Not found | Not found | | Seg | seg | seg |
40 |
47 |
NA | Not found | Not found | | Seg | seg | seg |
3 |
12 |
NA | Not found | Not found | | HMMPfam | PF00069 | Pkinase |
20 |
334 |
2.9e-71 | IPR017442 | Serine/threonine-protein kinase-like domain | | HMMPanther | PTHR22985 | SERINE/THREONINE PRO |
11 |
401 |
8.5e-210 | Not found | Not found | | HMMPanther | PTHR22985:SF89 | SERINE/THREONINE PRO |
11 |
401 |
8.5e-210 | Not found | Not found | | PatternScan | PS00107 | PROTEIN_KINASE_ATP |
26 |
51 |
NA | IPR017441 | Protein kinase, ATP binding site | | PatternScan | PS00108 | PROTEIN_KINASE_ST |
145 |
157 |
NA | IPR008271 | Serine/threonine-protein kinase, active site | | superfamily | SSF56112 | Protein kinase-like |
6 |
365 |
2.5e-71 | IPR011009 | Protein kinase-like domain | | HMMSmart | SM00220 | no description |
20 |
334 |
4.7e-75 | IPR002290 | Serine/threonine-protein kinase domain | | HMMSmart | SM00219 | no description |
20 |
328 |
2.5e-06 | IPR020635 | Tyrosine-protein kinase, subgroup, catalytic domain | | Gene3D | G3DSA:1.10.510.10 | no description |
80 |
354 |
4e-52 | Not found | Not found | | ProfileScan | PS50011 | PROTEIN_KINASE_DOM |
20 |
334 |
42.774 | IPR000719 | Protein kinase, catalytic domain | |
| Gene Ontology |
| GO Term | GO Type | Description |
| GO:0004672 |
Molecular Function |
protein kinase activity | | GO:0004674 |
Molecular Function |
protein serine/threonine kinase activity | | GO:0005524 |
Molecular Function |
ATP binding | | GO:0006468 |
Biological Process |
protein phosphorylation |
|
| Swiss-Prot |
| Best Hit | E_value |
Description | | Q9LSF1 | 2e-74 | OXI1_ARATH Serine/threonine-protein kinase OXI1 OS=Arabidopsis thaliana GN=OXI1 PE=2 SV=1 |
|
| TrEMBL |
| Best Hit | E_value |
Description | | Q9LT38 | 0.0 | Q9LT38_ARATH Protein kinase-like protein OS=Arabidopsis thaliana GN=At3g20830 PE=2 SV=1 |
|
| KEGG |
| Best Hit | E_value | KO | EC or Symbol |
Description | | clu:CLUG_05290 | 1e-65 | K08286 | E2.7.11.- | protein-serine/threonine kinase |
|
| Gene Cluster |
| Orthologs |
| OrthoMCL Group | Species | Gene List | | ORTHOMCL7911(9 genes,7 taxa): | Arabidopsis thaliana | AT3G20830.1 | | ORTHOMCL7911(9 genes,7 taxa): | Brassica oleracea | Bol038441 | | ORTHOMCL7911(9 genes,7 taxa): | Brassica rapa | Bra035740 | | ORTHOMCL7911(9 genes,7 taxa): | Vitis vinifera | GSVIVT01025309001 | | ORTHOMCL7911(9 genes,7 taxa): | Oryza sativa | Os09t0486700-01 | | ORTHOMCL7911(9 genes,7 taxa): | Populus trichocarpa | POPTR_0001s05570.1 | | ORTHOMCL7911(9 genes,7 taxa): | Populus trichocarpa | POPTR_0003s20480.1 | | ORTHOMCL7911(9 genes,7 taxa): | Sorghum bicolor | Sb02g028250.1 | | ORTHOMCL7911(9 genes,7 taxa): | Sorghum bicolor | Sb07g027930.1 |
|
| Tandem Duplication |
| Cluster | Gene Num. | Gene List | The tandem genes of this gene was not detected with strict parameters, so there is no information collected in Bolbase. |
|
| Synteny Analysis |
| Synteny Genes |
| Compared to A.thaliana |
Compared to B.rapa |
| Synteny Regions |
|
|
| Trplicated Block |
| Block | Best Hit | Start | END | Chromosome | Subgenome | Num. of Gene Pairs on Block | | F | AT3G20830 | 7284963 | 7286260 | Chr3 | Subgenome_III(LF) | 217 | |
|
