Basic Information
Gene Model:Bol032977
Gene Family:Protein Kinase Gene Families
Chromosome:C06
Scaffold:Scaffold000046
Sequence:
 | 
Gene Structure
Nucleotide Length:1769 bp
Transcript Length:1677 bp
Protein Length:558 aa
Strand:+
Location:C06: 5103267 : 5105035
Gene CDSs(2): 1-485 | 578-1769 |
Protein Sequence Features
Interpro
DatabaseTermsIdentifierStartEndE-valueInterPro IDDescription
ProfileScanPS50011PROTEIN_KINASE_DOM 235 516 39.623IPR000719Protein kinase, catalytic domain
PatternScanPS00108PROTEIN_KINASE_ST 356 368 NAIPR008271Serine/threonine-protein kinase, active site
PatternScanPS00107PROTEIN_KINASE_ATP 241 265 NAIPR017441Protein kinase, ATP binding site
HMMSmartSM00219no description 235 505 5.8e-34IPR020635Tyrosine-protein kinase, subgroup, catalytic domain
HMMSmartSM00220no description 235 505 2.3e-41IPR002290Serine/threonine-protein kinase domain
HMMPfamPF00069Pkinase 235 433 2.2e-52IPR017442Serine/threonine-protein kinase-like domain
HMMPfamPF00139Lectin_legB 23 150 1.2e-39IPR001220Legume lectin, beta chain
superfamilySSF49899Concanavalin A-like 27 279 1.7e-45IPR008985Concanavalin A-like lectin/glucanase
superfamilySSF56112Protein kinase-like 205 505 5e-83IPR011009Protein kinase-like domain
HMMPantherPTHR23258:SF436RECEPTOR LECTIN KINA 147 551 9.2e-263Not foundNot found
HMMPantherPTHR23258SERINE-THREONINE PRO 147 551 9.2e-263Not foundNot found
Gene3DG3DSA:3.30.200.20no description 216 311 6.7e-25Not foundNot found
Gene3DG3DSA:1.10.510.10no description 314 508 9.1e-50Not foundNot found
Gene3DG3DSA:2.60.120.200no description 1 153 1.6e-20IPR013320Concanavalin A-like lectin/glucanase, subgroup
Gene Ontology
GO TermGO TypeDescription
GO:0004672 Molecular Function protein kinase activity
GO:0004674 Molecular Function protein serine/threonine kinase activity
GO:0005488 Molecular Function binding
GO:0005524 Molecular Function ATP binding
GO:0006468 Biological Process protein phosphorylation
Swiss-Prot
Best HitE_value Description
Q9M0201e-108LRKA2_ARATH Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1
TrEMBL
Best HitE_value Description
O045330.0O04533_ARATH F20P5.15 protein OS=Arabidopsis thaliana GN=At1g70130 PE=4 SV=1
KEGG
Best HitE_valueKOEC or Symbol Description
ath:AT2G137901e-57K13417SERK4, BKK1--
Gene Cluster
Orthologs
OrthoMCL GroupSpeciesGene List
ORTHOMCL11(177 genes,8 taxa):Arabidopsis thalianaAT1G70110.1
ORTHOMCL11(177 genes,8 taxa):Arabidopsis thalianaAT1G70130.1
ORTHOMCL11(177 genes,8 taxa):Arabidopsis thalianaAT2G37710.1
ORTHOMCL11(177 genes,8 taxa):Arabidopsis thalianaAT3G45330.1
ORTHOMCL11(177 genes,8 taxa):Arabidopsis thalianaAT3G45410.1
ORTHOMCL11(177 genes,8 taxa):Arabidopsis thalianaAT3G45420.1
ORTHOMCL11(177 genes,8 taxa):Arabidopsis thalianaAT3G45430.1
ORTHOMCL11(177 genes,8 taxa):Arabidopsis thalianaAT3G45440.1
ORTHOMCL11(177 genes,8 taxa):Arabidopsis thalianaAT3G53810.1
ORTHOMCL11(177 genes,8 taxa):Arabidopsis thalianaAT3G55550.1
ORTHOMCL11(177 genes,8 taxa):Arabidopsis thalianaAT3G59700.1
ORTHOMCL11(177 genes,8 taxa):Arabidopsis thalianaAT3G59730.1
ORTHOMCL11(177 genes,8 taxa):Arabidopsis thalianaAT3G59740.1
ORTHOMCL11(177 genes,8 taxa):Arabidopsis thalianaAT3G59750.1
ORTHOMCL11(177 genes,8 taxa):Arabidopsis thalianaAT4G02410.1
ORTHOMCL11(177 genes,8 taxa):Arabidopsis thalianaAT4G02420.1
ORTHOMCL11(177 genes,8 taxa):Arabidopsis thalianaAT4G29050.1
ORTHOMCL11(177 genes,8 taxa):Arabidopsis thalianaAT5G59260.1
ORTHOMCL11(177 genes,8 taxa):Arabidopsis thalianaAT5G59270.1
ORTHOMCL11(177 genes,8 taxa):Arabidopsis thalianaAT5G60270.1
ORTHOMCL11(177 genes,8 taxa):Arabidopsis thalianaAT5G60280.1
ORTHOMCL11(177 genes,8 taxa):Arabidopsis thalianaAT5G60300.3
ORTHOMCL11(177 genes,8 taxa):Arabidopsis thalianaAT5G60310.1
ORTHOMCL11(177 genes,8 taxa):Arabidopsis thalianaAT5G60320.1
ORTHOMCL11(177 genes,8 taxa):Brassica oleraceaBol008938
ORTHOMCL11(177 genes,8 taxa):Brassica oleraceaBol017230
ORTHOMCL11(177 genes,8 taxa):Brassica oleraceaBol017234
ORTHOMCL11(177 genes,8 taxa):Brassica oleraceaBol017235
ORTHOMCL11(177 genes,8 taxa):Brassica oleraceaBol021105
ORTHOMCL11(177 genes,8 taxa):Brassica oleraceaBol021637
ORTHOMCL11(177 genes,8 taxa):Brassica oleraceaBol023626
ORTHOMCL11(177 genes,8 taxa):Brassica oleraceaBol023809
ORTHOMCL11(177 genes,8 taxa):Brassica oleraceaBol025579
ORTHOMCL11(177 genes,8 taxa):Brassica oleraceaBol025886
ORTHOMCL11(177 genes,8 taxa):Brassica oleraceaBol029475
ORTHOMCL11(177 genes,8 taxa):Brassica oleraceaBol030667
ORTHOMCL11(177 genes,8 taxa):Brassica oleraceaBol032977
ORTHOMCL11(177 genes,8 taxa):Brassica oleraceaBol037625
ORTHOMCL11(177 genes,8 taxa):Brassica oleraceaBol037626
ORTHOMCL11(177 genes,8 taxa):Brassica oleraceaBol041338
ORTHOMCL11(177 genes,8 taxa):Brassica oleraceaBol041340
ORTHOMCL11(177 genes,8 taxa):Brassica oleraceaBol044225
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra000015
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra000319
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra000320
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra000880
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra000881
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra002064
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra002490
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra002497
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra002498
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra002499
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra002500
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra002597
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra003216
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra003386
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra004777
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra005168
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra006668
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra006669
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra006670
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra007028
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra007786
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra007896
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra010340
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra011080
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra014532
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra014736
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra016234
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra016235
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra018553
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra019469
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra020258
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra020259
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra020338
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra029544
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra033984
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra035326
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra036269
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra037688
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra038286
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra038287
ORTHOMCL11(177 genes,8 taxa):Brassica rapaBra038289
ORTHOMCL11(177 genes,8 taxa):Vitis viniferaGSVIVT01016502001
ORTHOMCL11(177 genes,8 taxa):Vitis viniferaGSVIVT01029708001
ORTHOMCL11(177 genes,8 taxa):Vitis viniferaGSVIVT01034126001
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs02t0297800-00
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs02t0640500-01
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs03t0258000-01
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs03t0258101-00
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs03t0772600-01
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs03t0823000-01
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs04t0531400-01
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs04t0531500-01
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs06t0253300-00
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs07t0129800-00
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs07t0129900-00
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs07t0130100-01
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs07t0130200-01
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs07t0130400-01
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs07t0130600-00
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs07t0130800-01
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs07t0130800-02
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs07t0130900-00
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs07t0131000-00
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs07t0131050-00
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs07t0131100-00
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs07t0131300-00
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs07t0131400-00
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs07t0131500-00
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs07t0131700-00
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs07t0132100-00
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs07t0132150-00
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs07t0283050-00
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs07t0283125-00
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs07t0575600-01
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs07t0575600-02
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs07t0575700-01
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs07t0575750-00
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs09t0268000-00
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs10t0441900-01
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs10t0442000-01
ORTHOMCL11(177 genes,8 taxa):Oryza sativaOs12t0574700-00
ORTHOMCL11(177 genes,8 taxa):Populus trichocarpaPOPTR_0001s25090.1
ORTHOMCL11(177 genes,8 taxa):Populus trichocarpaPOPTR_0003s19600.1
ORTHOMCL11(177 genes,8 taxa):Populus trichocarpaPOPTR_0006s08870.1
ORTHOMCL11(177 genes,8 taxa):Populus trichocarpaPOPTR_0006s08890.1
ORTHOMCL11(177 genes,8 taxa):Populus trichocarpaPOPTR_0006s08900.1
ORTHOMCL11(177 genes,8 taxa):Populus trichocarpaPOPTR_0006s08940.1
ORTHOMCL11(177 genes,8 taxa):Populus trichocarpaPOPTR_0006s08970.1
ORTHOMCL11(177 genes,8 taxa):Populus trichocarpaPOPTR_0008s05860.1
ORTHOMCL11(177 genes,8 taxa):Populus trichocarpaPOPTR_0009s04020.1
ORTHOMCL11(177 genes,8 taxa):Populus trichocarpaPOPTR_0009s04030.1
ORTHOMCL11(177 genes,8 taxa):Populus trichocarpaPOPTR_0009s04040.1
ORTHOMCL11(177 genes,8 taxa):Populus trichocarpaPOPTR_0009s04050.1
ORTHOMCL11(177 genes,8 taxa):Populus trichocarpaPOPTR_0009s04080.1
ORTHOMCL11(177 genes,8 taxa):Populus trichocarpaPOPTR_0009s04100.1
ORTHOMCL11(177 genes,8 taxa):Populus trichocarpaPOPTR_0009s04120.1
ORTHOMCL11(177 genes,8 taxa):Populus trichocarpaPOPTR_0010s20820.1
ORTHOMCL11(177 genes,8 taxa):Populus trichocarpaPOPTR_0016s10510.1
ORTHOMCL11(177 genes,8 taxa):Populus trichocarpaPOPTR_1407s00200.1
ORTHOMCL11(177 genes,8 taxa):Populus trichocarpaPOPTR_1896s00210.1
ORTHOMCL11(177 genes,8 taxa):Sorghum bicolorSb01g003020.1
ORTHOMCL11(177 genes,8 taxa):Sorghum bicolorSb01g003030.1
ORTHOMCL11(177 genes,8 taxa):Sorghum bicolorSb01g006760.1
ORTHOMCL11(177 genes,8 taxa):Sorghum bicolorSb01g006770.1
ORTHOMCL11(177 genes,8 taxa):Sorghum bicolorSb01g006780.1
ORTHOMCL11(177 genes,8 taxa):Sorghum bicolorSb01g020940.1
ORTHOMCL11(177 genes,8 taxa):Sorghum bicolorSb01g020950.1
ORTHOMCL11(177 genes,8 taxa):Sorghum bicolorSb01g020960.1
ORTHOMCL11(177 genes,8 taxa):Sorghum bicolorSb01g040590.1
ORTHOMCL11(177 genes,8 taxa):Sorghum bicolorSb02g002210.1
ORTHOMCL11(177 genes,8 taxa):Sorghum bicolorSb02g002220.1
ORTHOMCL11(177 genes,8 taxa):Sorghum bicolorSb02g002240.1
ORTHOMCL11(177 genes,8 taxa):Sorghum bicolorSb02g002250.1
ORTHOMCL11(177 genes,8 taxa):Sorghum bicolorSb02g002290.1
ORTHOMCL11(177 genes,8 taxa):Sorghum bicolorSb02g002330.1
ORTHOMCL11(177 genes,8 taxa):Sorghum bicolorSb02g009160.1
ORTHOMCL11(177 genes,8 taxa):Sorghum bicolorSb02g009170.1
ORTHOMCL11(177 genes,8 taxa):Sorghum bicolorSb02g037290.1
ORTHOMCL11(177 genes,8 taxa):Sorghum bicolorSb02g037300.1
ORTHOMCL11(177 genes,8 taxa):Sorghum bicolorSb04g012281.1
ORTHOMCL11(177 genes,8 taxa):Sorghum bicolorSb04g033790.1
ORTHOMCL11(177 genes,8 taxa):Sorghum bicolorSb06g023510.1
ORTHOMCL11(177 genes,8 taxa):Sorghum bicolorSb06g023520.1
ORTHOMCL11(177 genes,8 taxa):Sorghum bicolorSb07g003240.1
ORTHOMCL11(177 genes,8 taxa):Sorghum bicolorSb08g000750.1
ORTHOMCL11(177 genes,8 taxa):Sorghum bicolorSb08g019050.1
ORTHOMCL11(177 genes,8 taxa):Sorghum bicolorSb09g028870.1
ORTHOMCL11(177 genes,8 taxa):Sorghum bicolorSb09g028880.1
ORTHOMCL11(177 genes,8 taxa):Sorghum bicolorSb10g011000.1
ORTHOMCL11(177 genes,8 taxa):Sorghum bicolorSb10g011010.1
ORTHOMCL11(177 genes,8 taxa):Sorghum bicolorSb10g011150.1
ORTHOMCL11(177 genes,8 taxa):Sorghum bicolorSb10g011160.1
ORTHOMCL11(177 genes,8 taxa):Sorghum bicolorSb10g011170.1
ORTHOMCL11(177 genes,8 taxa):Carica papayaevm.TU.supercontig_1.426
ORTHOMCL11(177 genes,8 taxa):Carica papayaevm.TU.supercontig_228.2
Tandem Duplication
ClusterGene Num.Gene List
Cluster_16762Bol032976 Bol032977 
Synteny Analysis
Synteny Genes
Compared to A.thaliana Compared to B.rapa
Synteny Regions
SpeciesRegionMapped SpeciesMapped RegionNum. of Genewise
B.oleraceaC06:4201241..5347428 (-)A.thalianaChr1:26266609..26939106 (+)87
SpeciesRegionMapped SpeciesMapped RegionNum. of Genewise
B.oleraceaC06:4201241..5223016 (+)B.rapaA09:19597984..20394745 (+)33
Trplicated Block
BlockBest HitStartENDChromosomeSubgenomeNum. of Gene Pairs on Block
EAT1G701302640974326411801Chr1Subgenome_III(LF)587
 
@2012 Department of Genomics and Molecular Biology, Oil Crops Research Institute.


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