Basic Information
Gene Model:Bol032005
Gene Family:Protein Kinase Gene Families
Chromosome:C05
Scaffold:Scaffold000051
Sequence:
 | 
Gene Structure
Nucleotide Length:3372 bp
Transcript Length:3297 bp
Protein Length:1098 aa
Strand:+
Location:C05: 8915219 : 8918590
Gene CDSs(2): 1-2917 | 2993-3372 |
Protein Sequence Features
Interpro
DatabaseTermsIdentifierStartEndE-valueInterPro IDDescription
PatternScanPS00108PROTEIN_KINASE_ST 922 934 NAIPR008271Serine/threonine-protein kinase, active site
PatternScanPS00105AA_TRANSFER_CLASS_1 479 492 NAIPR004838Aminotransferases, class-I, pyridoxal-phosphate-binding site
PatternScanPS00107PROTEIN_KINASE_ATP 807 830 NAIPR017441Protein kinase, ATP binding site
HMMPantherPTHR23258SERINE-THREONINE PRO 80 980 2.1e-256Not foundNot found
HMMPantherPTHR23258:SF462LRR RECEPTOR-LIKE KI 80 980 2.1e-256Not foundNot found
HMMPfamPF00560LRR_1 677 700 1.3IPR001611Leucine-rich repeat
HMMPfamPF00069Pkinase 801 1000 1.7e-39IPR017442Serine/threonine-protein kinase-like domain
HMMPfamPF00560LRR_1 605 627 0.0099IPR001611Leucine-rich repeat
HMMPfamPF00560LRR_1 654 675 0.016IPR001611Leucine-rich repeat
HMMPfamPF00560LRR_1 581 603 0.028IPR001611Leucine-rich repeat
HMMPfamPF00560LRR_1 533 555 0.019IPR001611Leucine-rich repeat
HMMPfamPF00560LRR_1 557 579 0.00031IPR001611Leucine-rich repeat
HMMPfamPF00560LRR_1 437 459 0.013IPR001611Leucine-rich repeat
HMMPfamPF00560LRR_1 485 507 1.1IPR001611Leucine-rich repeat
HMMPfamPF00560LRR_1 341 363 1.9IPR001611Leucine-rich repeat
HMMPfamPF00560LRR_1 389 411 1.3IPR001611Leucine-rich repeat
HMMPfamPF00560LRR_1 317 339 1.2IPR001611Leucine-rich repeat
HMMPfamPF00560LRR_1 196 218 0.026IPR001611Leucine-rich repeat
HMMPfamPF00560LRR_1 293 315 0.022IPR001611Leucine-rich repeat
HMMPfamPF00560LRR_1 172 194 0.01IPR001611Leucine-rich repeat
HMMPfamPF00560LRR_1 124 146 0.0019IPR001611Leucine-rich repeat
HMMPfamPF00560LRR_1 148 170 0.0016IPR001611Leucine-rich repeat
HMMPfamPF08263LRRNT_2 55 96 2.8e-15IPR013210Leucine-rich repeat, N-terminal
ProfileScanPS50011PROTEIN_KINASE_DOM 801 1092 36.287IPR000719Protein kinase, catalytic domain
superfamilySSF52058L domain-like 79 405 8.1e-67Not foundNot found
superfamilySSF52047RNI-like 380 721 1e-67Not foundNot found
superfamilySSF56112Protein kinase-like 771 1082 3.7e-71IPR011009Protein kinase-like domain
HMMSmartSM00219no description 801 1074 2.6e-15IPR020635Tyrosine-protein kinase, subgroup, catalytic domain
HMMSmartSM00220no description 801 1074 2.4e-24IPR002290Serine/threonine-protein kinase domain
HMMSmartSM00369no description 603 627 20IPR003591Leucine-rich repeat, typical subtype
HMMSmartSM00369no description 652 679 82IPR003591Leucine-rich repeat, typical subtype
HMMSmartSM00369no description 435 459 1.6e+02IPR003591Leucine-rich repeat, typical subtype
HMMSmartSM00369no description 555 578 60IPR003591Leucine-rich repeat, typical subtype
HMMSmartSM00369no description 315 339 1.8e+02IPR003591Leucine-rich repeat, typical subtype
HMMSmartSM00369no description 194 218 87IPR003591Leucine-rich repeat, typical subtype
HMMSmartSM00369no description 146 170 13IPR003591Leucine-rich repeat, typical subtype
HMMSmartSM00369no description 122 145 93IPR003591Leucine-rich repeat, typical subtype
Gene3DG3DSA:1.10.510.10no description 882 1077 1.4e-49Not foundNot found
Gene3DG3DSA:3.80.10.10no description 524 714 9.4e-45Not foundNot found
Gene3DG3DSA:3.30.200.20no description 755 879 2.8e-15Not foundNot found
Gene3DG3DSA:3.80.10.10no description 308 522 2.3e-58Not foundNot found
Gene3DG3DSA:3.80.10.10no description 52 306 2.2e-55Not foundNot found
Segsegseg 734 756 NANot foundNot found
Segsegseg 763 774 NANot foundNot found
Segsegseg 582 592 NANot foundNot found
Segsegseg 456 479 NANot foundNot found
Segsegseg 226 235 NANot foundNot found
Segsegseg 111 136 NANot foundNot found
Segsegseg 62 79 NANot foundNot found
Segsegseg 32 42 NANot foundNot found
Gene Ontology
GO TermGO TypeDescription
GO:0003824 Molecular Function catalytic activity
GO:0004672 Molecular Function protein kinase activity
GO:0004674 Molecular Function protein serine/threonine kinase activity
GO:0005515 Molecular Function protein binding
GO:0005524 Molecular Function ATP binding
GO:0006468 Biological Process protein phosphorylation
GO:0009058 Biological Process biosynthetic process
GO:0030170 Molecular Function pyridoxal phosphate binding
Swiss-Prot
Best HitE_value Description
C0LGF50.0Y1341_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2
TrEMBL
Best HitE_value Description
B9SM680.0B9SM68_RICCO Leucine-rich repeat receptor protein kinase EXS, putative OS=Ricinus communis GN=RCOM_0296440 PE=4 SV=1
KEGG
Best HitE_valueKOEC or Symbol Description
ath:AT1G758201e-170K00924E2.7.1.---
Gene Cluster
Orthologs
OrthoMCL GroupSpeciesGene List
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT1G08590.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT1G09970.2
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT1G17230.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT1G17750.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT1G28440.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT1G34110.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT1G72180.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT1G73066.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT1G73080.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT1G75820.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT2G33170.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT3G19700.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT3G24240.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT3G49670.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT4G20140.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT4G20270.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT4G26540.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT4G28490.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT4G28650.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT5G25910.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT5G25930.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT5G44700.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT5G48940.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT5G49660.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT5G56040.2
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT5G61480.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT5G63930.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT5G65700.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT5G65710.1
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol001355
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol002765
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol003589
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol004350
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol005730
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol006253
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol006354
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol007456
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol008392
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol011915
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol012386
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol012709
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol015744
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol016985
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol017009
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol019648
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol019660
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol021078
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol022084
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol022317
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol022318
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol024340
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol027692
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol027729
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol028329
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol028337
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol031031
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol031228
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol032005
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol032343
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol035002
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol036776
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol037952
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol038298
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol039646
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol040029
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol040075
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol040608
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol041836
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra002855
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra003858
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra003889
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra008505
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra009869
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra009871
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra010867
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra011033
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra011046
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra012925
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra012952
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra013446
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra013451
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra014998
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra015812
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra016019
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra016081
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra018468
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra019971
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra020518
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra020928
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra021831
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra024413
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra025113
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra025951
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra025988
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra026425
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra030098
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra030734
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra031693
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra032909
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra034446
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra036154
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra037825
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra038228
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra038810
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra039525
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra040495
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01004465001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01007688001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01007707001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01009941001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01010052001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01010078001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01013705001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01014037001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01014750001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01016126001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01019259001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01020514001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01021118001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01023246001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01026000001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01028542001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01029038001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01029044001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01035303001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01035314001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01035367001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01038628001
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs01t0170300-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs01t0239700-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs01t0239700-02
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs01t0239700-03
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs01t0742400-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs01t0742400-02
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs01t0742400-03
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs01t0878300-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs01t0878300-02
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs02t0111800-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs02t0111800-02
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs02t0227700-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs02t0228300-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs03t0145102-00
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs03t0228800-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs03t0773700-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs04t0132500-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs04t0132500-02
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs05t0170300-00
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs05t0595800-00
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs06t0557100-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs06t0557100-02
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs06t0557400-00
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs06t0589800-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs06t0717200-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs07t0134200-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs07t0152200-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs07t0498400-00
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs08t0376300-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs08t0446200-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs08t0493800-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs09t0326100-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs10t0155700-00
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs10t0155800-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs11t0232100-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs11t0232100-02
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs11t0233800-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs12t0632800-00
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs12t0632900-01
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0001s00820.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0001s12290.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0001s12420.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0001s14140.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0001s14220.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0001s47150.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0002s02140.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0002s06380.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0002s07170.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0002s10700.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0002s11230.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0002s25820.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0003s10680.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0003s15490.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0003s15600.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0003s17350.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0003s17430.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0004s04880.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0004s23260.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0005s21110.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0005s21990.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0005s26300.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0006s25210.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0007s01340.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0007s14500.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0008s00810.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0008s00970.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0009s08540.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0011s05710.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0011s05710.2
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0011s14310.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0011s16760.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0012s02990.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0012s08990.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0012s09070.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0013s04630.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0013s04810.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0015s09240.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0017s04790.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0018s04880.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0018s09510.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0018s09520.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0018s09540.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0018s09550.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0019s03830.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0019s04220.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0019s10720.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0019s10720.2
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0019s10720.3
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0290s00210.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0290s00240.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0830s00200.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb01g006690.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb01g025950.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb01g041950.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb01g047250.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb02g002450.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb02g003080.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb02g022100.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb02g022120.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb02g027710.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb02g033810.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb03g000350.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb03g004520.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb03g034210.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb03g034220.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb03g041570.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb04g000920.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb04g008110.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb04g009100.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb04g009110.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb05g007480.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb05g007490.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb06g001310.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb06g021910.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb07g003230.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb07g019130.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb07g021940.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb07g021950.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb07g021960.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb07g027920.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb07g028670.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb08g022780.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb09g005100.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb09g005150.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb09g026090.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb09g030870.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb10g022060.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb10g022910.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb10g030270.1
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.contig_27606.2
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_113.42
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_12.108
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_129.39
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_13.280
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_153.18
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_153.4
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_160.5
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_160.8
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_20.71
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_229.10
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_26.115
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_26.311
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_30.49
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_30.65
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_49.49
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_51.39
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_51.9
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_59.82
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_59.92
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_7.1
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_7.215
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_78.20
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_8.178
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_87.25
Tandem Duplication
ClusterGene Num.Gene List

The tandem genes of this gene was not detected with strict parameters, so there is no information collected in Bolbase.

Synteny Analysis
Synteny Genes
Compared to A.thaliana Compared to B.rapa
Synteny Regions
SpeciesRegionMapped SpeciesMapped RegionNum. of Genewise
B.oleraceaC05:7196253..9300555 (-)A.thalianaChr1:12237878..12592737 (+)16
SpeciesRegionMapped SpeciesMapped RegionNum. of Genewise
B.oleraceaC05:8722467..10248806 (+)B.rapaA06:15001876..15946526 (-)19
Trplicated Block
BlockBest HitStartENDChromosomeSubgenomeNum. of Gene Pairs on Block
BAT1G341101241717612421189Chr1Subgenome_I29
 
@2012 Department of Genomics and Molecular Biology, Oil Crops Research Institute.


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