Basic Information
Gene Model:Bol021078
Gene Family:Protein Kinase Gene Families
Chromosome:C08
Scaffold:Scaffold000117
Sequence:
 | 
Gene Structure
Nucleotide Length:3066 bp
Transcript Length:3066 bp
Protein Length:1021 aa
Strand:+
Location:C08: 16679118 : 16682183
Gene CDSs(1): 1-3066 |
Protein Sequence Features
Interpro
DatabaseTermsIdentifierStartEndE-valueInterPro IDDescription
Segsegseg 183 205 NANot foundNot found
HMMPfamPF00069Pkinase 705 921 9.1e-44IPR017442Serine/threonine-protein kinase-like domain
HMMPfamPF00560LRR_1 501 523 0.88IPR001611Leucine-rich repeat
HMMPfamPF00560LRR_1 549 571 0.033IPR001611Leucine-rich repeat
HMMPfamPF00560LRR_1 573 596 1IPR001611Leucine-rich repeat
HMMPfamPF00560LRR_1 382 405 0.027IPR001611Leucine-rich repeat
HMMPfamPF00560LRR_1 454 476 1.2IPR001611Leucine-rich repeat
HMMPfamPF00560LRR_1 310 332 0.018IPR001611Leucine-rich repeat
HMMPfamPF00560LRR_1 334 356 0.026IPR001611Leucine-rich repeat
HMMPfamPF00560LRR_1 358 377 1.1IPR001611Leucine-rich repeat
HMMPfamPF00560LRR_1 286 308 0.0022IPR001611Leucine-rich repeat
HMMPfamPF00560LRR_1 214 236 0.0072IPR001611Leucine-rich repeat
HMMPfamPF00560LRR_1 190 212 0.011IPR001611Leucine-rich repeat
HMMPfamPF08263LRRNT_2 22 66 3.7e-12IPR013210Leucine-rich repeat, N-terminal
HMMPfamPF00560LRR_1 94 116 0.0021IPR001611Leucine-rich repeat
superfamilySSF52047RNI-like 52 345 2.5e-65Not foundNot found
superfamilySSF52047RNI-like 307 585 2e-57Not foundNot found
superfamilySSF56112Protein kinase-like 675 1001 2.9e-67IPR011009Protein kinase-like domain
Gene3DG3DSA:3.30.200.20no description 703 795 2.9e-14Not foundNot found
Gene3DG3DSA:1.10.510.10no description 798 1004 3.2e-47Not foundNot found
Gene3DG3DSA:3.80.10.10no description 373 617 3.9e-59Not foundNot found
Gene3DG3DSA:3.80.10.10no description 157 371 3.1e-60Not foundNot found
Gene3DG3DSA:3.80.10.10no description 24 155 2.5e-21Not foundNot found
ProfileScanPS50011PROTEIN_KINASE_DOM 705 1000 39.255IPR000719Protein kinase, catalytic domain
PatternScanPS00108PROTEIN_KINASE_ST 843 855 NAIPR008271Serine/threonine-protein kinase, active site
PatternScanPS00107PROTEIN_KINASE_ATP 711 736 NAIPR017441Protein kinase, ATP binding site
HMMSmartSM00364no description 571 591 26Not foundNot found
HMMSmartSM00220no description 705 993 5.5e-37IPR002290Serine/threonine-protein kinase domain
HMMSmartSM00219no description 705 993 3.7e-15IPR020635Tyrosine-protein kinase, subgroup, catalytic domain
HMMSmartSM00369no description 453 475 49IPR003591Leucine-rich repeat, typical subtype
HMMSmartSM00369no description 547 571 70IPR003591Leucine-rich repeat, typical subtype
HMMSmartSM00369no description 380 404 2.4e+02IPR003591Leucine-rich repeat, typical subtype
HMMSmartSM00369no description 428 452 52IPR003591Leucine-rich repeat, typical subtype
HMMSmartSM00364no description 452 471 19Not foundNot found
HMMSmartSM00364no description 356 376 3.1e+02Not foundNot found
HMMSmartSM00369no description 332 356 14IPR003591Leucine-rich repeat, typical subtype
HMMSmartSM00369no description 284 308 2e+02IPR003591Leucine-rich repeat, typical subtype
HMMSmartSM00364no description 188 208 3.1e+02Not foundNot found
HMMSmartSM00369no description 188 212 75IPR003591Leucine-rich repeat, typical subtype
HMMSmartSM00369no description 92 116 50IPR003591Leucine-rich repeat, typical subtype
HMMPantherPTHR23258SERINE-THREONINE PRO 51 899 6.4e-228Not foundNot found
HMMPantherPTHR23258:SF462LRR RECEPTOR-LIKE KI 51 899 6.4e-228Not foundNot found
Gene Ontology
GO TermGO TypeDescription
GO:0004672 Molecular Function protein kinase activity
GO:0004674 Molecular Function protein serine/threonine kinase activity
GO:0005515 Molecular Function protein binding
GO:0005524 Molecular Function ATP binding
GO:0006468 Biological Process protein phosphorylation
Swiss-Prot
Best HitE_value Description
Q9SYQ80.0CLV1_ARATH Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3
TrEMBL
Best HitE_value Description
Q9FRS60.0Q9FRS6_ARATH F22O13.7 OS=Arabidopsis thaliana GN=LRR-RLK PE=2 SV=1
KEGG
Best HitE_valueKOEC or Symbol Description
ath:AT1G758200.0K00924E2.7.1.---
Gene Cluster
Orthologs
OrthoMCL GroupSpeciesGene List
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT1G08590.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT1G09970.2
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT1G17230.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT1G17750.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT1G28440.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT1G34110.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT1G72180.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT1G73066.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT1G73080.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT1G75820.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT2G33170.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT3G19700.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT3G24240.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT3G49670.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT4G20140.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT4G20270.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT4G26540.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT4G28490.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT4G28650.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT5G25910.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT5G25930.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT5G44700.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT5G48940.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT5G49660.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT5G56040.2
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT5G61480.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT5G63930.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT5G65700.1
ORTHOMCL4(282 genes,8 taxa):Arabidopsis thalianaAT5G65710.1
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol001355
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol002765
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol003589
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol004350
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol005730
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol006253
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol006354
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol007456
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol008392
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol011915
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol012386
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol012709
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol015744
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol016985
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol017009
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol019648
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol019660
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol021078
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol022084
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol022317
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol022318
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol024340
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol027692
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol027729
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol028329
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol028337
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol031031
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol031228
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol032005
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol032343
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol035002
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol036776
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol037952
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol038298
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol039646
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol040029
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol040075
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol040608
ORTHOMCL4(282 genes,8 taxa):Brassica oleraceaBol041836
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra002855
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra003858
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra003889
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra008505
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra009869
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra009871
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra010867
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra011033
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra011046
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra012925
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra012952
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra013446
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra013451
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra014998
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra015812
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra016019
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra016081
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra018468
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra019971
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra020518
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra020928
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra021831
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra024413
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra025113
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra025951
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra025988
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra026425
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra030098
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra030734
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra031693
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra032909
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra034446
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra036154
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra037825
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra038228
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra038810
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra039525
ORTHOMCL4(282 genes,8 taxa):Brassica rapaBra040495
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01004465001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01007688001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01007707001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01009941001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01010052001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01010078001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01013705001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01014037001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01014750001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01016126001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01019259001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01020514001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01021118001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01023246001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01026000001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01028542001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01029038001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01029044001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01035303001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01035314001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01035367001
ORTHOMCL4(282 genes,8 taxa):Vitis viniferaGSVIVT01038628001
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs01t0170300-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs01t0239700-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs01t0239700-02
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs01t0239700-03
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs01t0742400-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs01t0742400-02
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs01t0742400-03
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs01t0878300-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs01t0878300-02
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs02t0111800-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs02t0111800-02
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs02t0227700-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs02t0228300-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs03t0145102-00
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs03t0228800-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs03t0773700-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs04t0132500-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs04t0132500-02
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs05t0170300-00
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs05t0595800-00
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs06t0557100-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs06t0557100-02
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs06t0557400-00
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs06t0589800-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs06t0717200-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs07t0134200-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs07t0152200-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs07t0498400-00
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs08t0376300-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs08t0446200-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs08t0493800-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs09t0326100-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs10t0155700-00
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs10t0155800-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs11t0232100-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs11t0232100-02
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs11t0233800-01
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs12t0632800-00
ORTHOMCL4(282 genes,8 taxa):Oryza sativaOs12t0632900-01
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0001s00820.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0001s12290.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0001s12420.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0001s14140.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0001s14220.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0001s47150.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0002s02140.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0002s06380.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0002s07170.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0002s10700.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0002s11230.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0002s25820.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0003s10680.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0003s15490.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0003s15600.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0003s17350.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0003s17430.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0004s04880.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0004s23260.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0005s21110.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0005s21990.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0005s26300.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0006s25210.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0007s01340.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0007s14500.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0008s00810.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0008s00970.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0009s08540.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0011s05710.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0011s05710.2
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0011s14310.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0011s16760.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0012s02990.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0012s08990.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0012s09070.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0013s04630.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0013s04810.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0015s09240.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0017s04790.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0018s04880.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0018s09510.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0018s09520.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0018s09540.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0018s09550.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0019s03830.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0019s04220.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0019s10720.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0019s10720.2
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0019s10720.3
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0290s00210.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0290s00240.1
ORTHOMCL4(282 genes,8 taxa):Populus trichocarpaPOPTR_0830s00200.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb01g006690.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb01g025950.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb01g041950.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb01g047250.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb02g002450.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb02g003080.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb02g022100.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb02g022120.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb02g027710.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb02g033810.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb03g000350.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb03g004520.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb03g034210.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb03g034220.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb03g041570.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb04g000920.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb04g008110.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb04g009100.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb04g009110.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb05g007480.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb05g007490.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb06g001310.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb06g021910.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb07g003230.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb07g019130.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb07g021940.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb07g021950.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb07g021960.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb07g027920.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb07g028670.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb08g022780.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb09g005100.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb09g005150.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb09g026090.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb09g030870.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb10g022060.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb10g022910.1
ORTHOMCL4(282 genes,8 taxa):Sorghum bicolorSb10g030270.1
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.contig_27606.2
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_113.42
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_12.108
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_129.39
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_13.280
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_153.18
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_153.4
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_160.5
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_160.8
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_20.71
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_229.10
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_26.115
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_26.311
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_30.49
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_30.65
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_49.49
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_51.39
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_51.9
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_59.82
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_59.92
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_7.1
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_7.215
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_78.20
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_8.178
ORTHOMCL4(282 genes,8 taxa):Carica papayaevm.TU.supercontig_87.25
Tandem Duplication
ClusterGene Num.Gene List

The tandem genes of this gene was not detected with strict parameters, so there is no information collected in Bolbase.

Synteny Analysis
Synteny Genes
Compared to A.thaliana Compared to B.rapa
Synteny Regions
SpeciesRegionMapped SpeciesMapped RegionNum. of Genewise
B.oleraceaC08:16527338..18299207 (+)A.thalianaChr1:2646189..3698013 (+)124
SpeciesRegionMapped SpeciesMapped RegionNum. of Genewise
B.oleraceaC08:16527338..17222475 (+)B.rapaA09:1597513..1754984 (+)18
Trplicated Block
BlockBest HitStartENDChromosomeSubgenomeNum. of Gene Pairs on Block
AAT1G0859027187782722221Chr1Subgenome_II291
 
@2012 Department of Genomics and Molecular Biology, Oil Crops Research Institute.


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