Basic Information
Gene Model:Bol011841
Gene Family:Protein Kinase Gene Families
Chromosome:Cun
Scaffold:Scaffold000206
Sequence:
 | 
Gene Structure
Nucleotide Length:2646 bp
Transcript Length:2646 bp
Protein Length:881 aa
Strand:-
Location:Scaffold000206: 401461 : 404106
Gene CDSs(1): 1-2646 |
Protein Sequence Features
Interpro
DatabaseTermsIdentifierStartEndE-valueInterPro IDDescription
HMMPantherPTHR23258SERINE-THREONINE PRO 62 874 3.9e-268Not foundNot found
HMMPantherPTHR23258:SF474LEUCINE-RICH REPEAT 62 874 3.9e-268Not foundNot found
Segsegseg 624 645 NANot foundNot found
Segsegseg 243 259 NANot foundNot found
HMMSmartSM00219no description 683 880 9.1e-09IPR020635Tyrosine-protein kinase, subgroup, catalytic domain
HMMSmartSM00220no description 683 880 2.5e-09IPR002290Serine/threonine-protein kinase domain
HMMSmartSM00369no description 492 516 1.6e+02IPR003591Leucine-rich repeat, typical subtype
HMMSmartSM00369no description 420 444 1.6e+02IPR003591Leucine-rich repeat, typical subtype
HMMSmartSM00369no description 293 316 1.2e+02IPR003591Leucine-rich repeat, typical subtype
HMMSmartSM00369no description 246 269 8.8IPR003591Leucine-rich repeat, typical subtype
HMMSmartSM00369no description 149 173 51IPR003591Leucine-rich repeat, typical subtype
HMMSmartSM00369no description 101 125 37IPR003591Leucine-rich repeat, typical subtype
Gene3DG3DSA:3.80.10.10no description 416 609 1.7e-43Not foundNot found
Gene3DG3DSA:3.30.200.20no description 677 831 5.2e-21Not foundNot found
Gene3DG3DSA:3.80.10.10no description 289 414 5.5e-19Not foundNot found
Gene3DG3DSA:3.80.10.10no description 7 288 1.7e-69Not foundNot found
ProfileScanPS50011PROTEIN_KINASE_DOM 683 881 28.739IPR000719Protein kinase, catalytic domain
PatternScanPS00108PROTEIN_KINASE_ST 816 828 NAIPR008271Serine/threonine-protein kinase, active site
PatternScanPS00107PROTEIN_KINASE_ATP 689 712 NAIPR017441Protein kinase, ATP binding site
superfamilySSF56112Protein kinase-like 653 871 3e-51IPR011009Protein kinase-like domain
superfamilySSF52058L domain-like 318 602 4.7e-61Not foundNot found
superfamilySSF52058L domain-like 7 306 8.4e-68Not foundNot found
HMMPfamPF00069Pkinase 683 871 3.7e-31IPR017442Serine/threonine-protein kinase-like domain
HMMPfamPF00560LRR_1 422 444 0.0035IPR001611Leucine-rich repeat
HMMPfamPF00560LRR_1 470 492 0.016IPR001611Leucine-rich repeat
HMMPfamPF00560LRR_1 295 317 0.019IPR001611Leucine-rich repeat
HMMPfamPF00560LRR_1 350 372 0.02IPR001611Leucine-rich repeat
HMMPfamPF00560LRR_1 248 270 0.0021IPR001611Leucine-rich repeat
HMMPfamPF00560LRR_1 272 293 0.025IPR001611Leucine-rich repeat
HMMPfamPF00560LRR_1 223 245 0.0078IPR001611Leucine-rich repeat
HMMPfamPF00560LRR_1 103 125 1.3IPR001611Leucine-rich repeat
HMMPfamPF00560LRR_1 151 173 0.0055IPR001611Leucine-rich repeat
HMMPfamPF08263LRRNT_2 10 50 5.2e-15IPR013210Leucine-rich repeat, N-terminal
HMMPfamPF00560LRR_1 79 101 0.95IPR001611Leucine-rich repeat
Gene Ontology
GO TermGO TypeDescription
GO:0004672 Molecular Function protein kinase activity
GO:0004674 Molecular Function protein serine/threonine kinase activity
GO:0005515 Molecular Function protein binding
GO:0005524 Molecular Function ATP binding
GO:0006468 Biological Process protein phosphorylation
Swiss-Prot
Best HitE_value Description
C0LGP40.0Y3475_ARATH Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=1 SV=1
TrEMBL
Best HitE_value Description
Q9SN800.0Q9SN80_ARATH Leucine-rich repeat receptor-like protein kinase OS=Arabidopsis thaliana GN=F1P2.130 PE=2 SV=1
KEGG
Best HitE_valueKOEC or Symbol Description
ath:AT5G204800.0K13428EFRLRR receptor-like serine/threonine-protein kinase EFR
Gene Cluster
Orthologs
OrthoMCL GroupSpeciesGene List
ORTHOMCL5(228 genes,8 taxa):Arabidopsis thalianaAT3G47090.1
ORTHOMCL5(228 genes,8 taxa):Arabidopsis thalianaAT3G47110.1
ORTHOMCL5(228 genes,8 taxa):Arabidopsis thalianaAT3G47570.1
ORTHOMCL5(228 genes,8 taxa):Arabidopsis thalianaAT3G47580.1
ORTHOMCL5(228 genes,8 taxa):Arabidopsis thalianaAT5G20480.1
ORTHOMCL5(228 genes,8 taxa):Arabidopsis thalianaAT5G39390.1
ORTHOMCL5(228 genes,8 taxa):Brassica oleraceaBol011841
ORTHOMCL5(228 genes,8 taxa):Brassica oleraceaBol012362
ORTHOMCL5(228 genes,8 taxa):Brassica oleraceaBol012381
ORTHOMCL5(228 genes,8 taxa):Brassica oleraceaBol017688
ORTHOMCL5(228 genes,8 taxa):Brassica oleraceaBol018099
ORTHOMCL5(228 genes,8 taxa):Brassica oleraceaBol024895
ORTHOMCL5(228 genes,8 taxa):Brassica oleraceaBol025932
ORTHOMCL5(228 genes,8 taxa):Brassica oleraceaBol025933
ORTHOMCL5(228 genes,8 taxa):Brassica oleraceaBol025934
ORTHOMCL5(228 genes,8 taxa):Brassica oleraceaBol025935
ORTHOMCL5(228 genes,8 taxa):Brassica oleraceaBol034603
ORTHOMCL5(228 genes,8 taxa):Brassica oleraceaBol035051
ORTHOMCL5(228 genes,8 taxa):Brassica rapaBra002305
ORTHOMCL5(228 genes,8 taxa):Brassica rapaBra005562
ORTHOMCL5(228 genes,8 taxa):Brassica rapaBra005563
ORTHOMCL5(228 genes,8 taxa):Brassica rapaBra006560
ORTHOMCL5(228 genes,8 taxa):Brassica rapaBra006717
ORTHOMCL5(228 genes,8 taxa):Brassica rapaBra007256
ORTHOMCL5(228 genes,8 taxa):Brassica rapaBra014313
ORTHOMCL5(228 genes,8 taxa):Brassica rapaBra015204
ORTHOMCL5(228 genes,8 taxa):Brassica rapaBra018128
ORTHOMCL5(228 genes,8 taxa):Brassica rapaBra018164
ORTHOMCL5(228 genes,8 taxa):Brassica rapaBra021289
ORTHOMCL5(228 genes,8 taxa):Brassica rapaBra022422
ORTHOMCL5(228 genes,8 taxa):Brassica rapaBra027572
ORTHOMCL5(228 genes,8 taxa):Brassica rapaBra027938
ORTHOMCL5(228 genes,8 taxa):Brassica rapaBra029191
ORTHOMCL5(228 genes,8 taxa):Brassica rapaBra035694
ORTHOMCL5(228 genes,8 taxa):Brassica rapaBra035695
ORTHOMCL5(228 genes,8 taxa):Brassica rapaBra036778
ORTHOMCL5(228 genes,8 taxa):Brassica rapaBra037076
ORTHOMCL5(228 genes,8 taxa):Brassica rapaBra039531
ORTHOMCL5(228 genes,8 taxa):Brassica rapaBra039532
ORTHOMCL5(228 genes,8 taxa):Vitis viniferaGSVIVT01000055001
ORTHOMCL5(228 genes,8 taxa):Vitis viniferaGSVIVT01000058001
ORTHOMCL5(228 genes,8 taxa):Vitis viniferaGSVIVT01000819001
ORTHOMCL5(228 genes,8 taxa):Vitis viniferaGSVIVT01001653001
ORTHOMCL5(228 genes,8 taxa):Vitis viniferaGSVIVT01001656001
ORTHOMCL5(228 genes,8 taxa):Vitis viniferaGSVIVT01002253001
ORTHOMCL5(228 genes,8 taxa):Vitis viniferaGSVIVT01009394001
ORTHOMCL5(228 genes,8 taxa):Vitis viniferaGSVIVT01010040001
ORTHOMCL5(228 genes,8 taxa):Vitis viniferaGSVIVT01016080001
ORTHOMCL5(228 genes,8 taxa):Vitis viniferaGSVIVT01020729001
ORTHOMCL5(228 genes,8 taxa):Vitis viniferaGSVIVT01020730001
ORTHOMCL5(228 genes,8 taxa):Vitis viniferaGSVIVT01020732001
ORTHOMCL5(228 genes,8 taxa):Vitis viniferaGSVIVT01020735001
ORTHOMCL5(228 genes,8 taxa):Vitis viniferaGSVIVT01021635001
ORTHOMCL5(228 genes,8 taxa):Vitis viniferaGSVIVT01021636001
ORTHOMCL5(228 genes,8 taxa):Vitis viniferaGSVIVT01021645001
ORTHOMCL5(228 genes,8 taxa):Vitis viniferaGSVIVT01021647001
ORTHOMCL5(228 genes,8 taxa):Vitis viniferaGSVIVT01021648001
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs01t0152000-01
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs01t0152800-01
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs01t0228250-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs01t0523100-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs01t0694000-01
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs01t0694100-01
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs02t0107700-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs02t0210700-01
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs02t0211600-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs02t0211800-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs02t0211900-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs02t0215500-01
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs02t0215700-01
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs02t0216000-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs02t0231700-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs02t0615300-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs02t0615500-01
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs02t0615500-02
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs02t0615800-01
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs02t0615800-02
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs02t0635600-01
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs04t0222300-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs04t0226800-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs04t0227200-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs06t0272000-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs06t0581500-01
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs06t0585950-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs06t0586400-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs06t0587000-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs06t0587900-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs06t0667000-01
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs07t0121200-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs07t0132000-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs08t0247700-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs08t0248100-01
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs10t0207100-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs10t0207250-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs10t0337400-01
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs10t0374600-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs10t0375000-01
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs11t0171800-01
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs11t0172150-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs11t0172700-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs11t0173300-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs11t0173432-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs11t0173500-01
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs11t0173500-03
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs11t0173800-01
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs11t0173900-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs11t0208900-01
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs11t0208900-02
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs11t0490200-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs11t0559200-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs11t0568800-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs11t0569300-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs11t0569500-01
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs11t0569600-01
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs11t0569800-01
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs11t0625900-01
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs11t0691800-01
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs11t0691900-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs11t0692100-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs11t0692500-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs11t0694400-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs11t0694600-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs11t0694850-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs11t0695000-01
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs11t0695700-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs11t0695800-01
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs12t0498650-00
ORTHOMCL5(228 genes,8 taxa):Oryza sativaOs12t0620000-00
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0003s14970.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0003s14970.2
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0003s14970.3
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0003s14980.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0004s05880.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0005s03430.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0005s03470.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0005s03930.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0005s03970.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0005s08180.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0005s15520.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0006s10000.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0006s28780.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0008s03370.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0008s03390.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0008s03400.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0010s23490.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0010s23500.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0011s07140.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0011s10410.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0011s10420.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0011s10430.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0011s14420.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0011s14430.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0012s04160.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0013s02170.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0015s04680.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0016s02970.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0016s12160.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0016s12170.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0017s00760.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0017s00770.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0017s01340.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0017s03350.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0018s02440.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0018s02450.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0019s13220.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0141s00210.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0141s00210.2
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_0672s00200.1
ORTHOMCL5(228 genes,8 taxa):Populus trichocarpaPOPTR_1358s00200.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb01g005880.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb02g006230.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb02g006240.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb02g006250.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb02g006260.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb02g006280.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb02g006310.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb03g005740.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb03g005780.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb03g005800.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb03g005903.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb03g005920.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb03g005930.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb03g006100.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb03g031895.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb04g001470.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb04g004040.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb04g007480.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb04g007490.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb04g022050.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb04g026010.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb04g026260.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb04g032380.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb05g001640.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb05g003250.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb05g004560.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb05g004660.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb05g005490.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb05g016900.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb05g018020.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb05g019490.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb05g019510.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb05g024520.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb05g026010.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb05g026040.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb05g027130.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb05g027140.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb06g003120.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb06g003130.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb06g003140.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb06g003150.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb08g000770.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb08g005400.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb08g005450.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb08g016290.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb08g021940.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb08g021950.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb09g004960.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb10g004760.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb10g005310.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb10g022860.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb10g027210.1
ORTHOMCL5(228 genes,8 taxa):Sorghum bicolorSb10g030860.1
ORTHOMCL5(228 genes,8 taxa):Carica papayaevm.TU.supercontig_112.35
ORTHOMCL5(228 genes,8 taxa):Carica papayaevm.TU.supercontig_19.168
ORTHOMCL5(228 genes,8 taxa):Carica papayaevm.TU.supercontig_19.190
ORTHOMCL5(228 genes,8 taxa):Carica papayaevm.TU.supercontig_386.6
ORTHOMCL5(228 genes,8 taxa):Carica papayaevm.TU.supercontig_596.2
ORTHOMCL5(228 genes,8 taxa):Carica papayaevm.TU.supercontig_7.106
Tandem Duplication
ClusterGene Num.Gene List

The tandem genes of this gene was not detected with strict parameters, so there is no information collected in Bolbase.

Synteny Analysis
Synteny Genes
Note: This gene was not anchored on pseudo-chromosomes.
Synteny Regions
SpeciesRegionMapped SpeciesMapped RegionNum. of Genewise

Note: this gene was not anchored on syntenic regions compared to A.thaliana genome.

SpeciesRegionMapped SpeciesMapped RegionNum. of Genewise

Note: this gene was not anchored on syntenic regions compared to B.rapa genome.

Trplicated Block
BlockBest HitStartENDChromosomeSubgenomeNum. of Gene Pairs on Block

Note: this gene was no corresponding triplicated genes.

 
@2012 Department of Genomics and Molecular Biology, Oil Crops Research Institute.


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